There is controversy regarding the original air dates and order of the episodes of Captain N: The Game Master; therefore, no dates are provided here. For the purposes of this article, the episodes are listed in the order in which The Shout! Factory placed them on the DVD sets, Captain N: The Game Master - The Complete Series and Captain N and the New Super Mario World.
Season 1: 1989[]
- Kevin in Videoland
- How's Bayou
- The Most Dangerous Game Master
- Videolympics
- Mega Trouble for Megaland
- Wishful Thinking
- Three Men and a Dragon
- Mr. and Mrs. Mother Brain
- Nightmare on Mother Brain's Street
- Simon the Ape-Man
- In Search of the King
- Metroid Sweet Metroid
- Happy Birthday, Megaman
Season 2: 1990[]
- Gameboy
- Queen of the Apes
- Quest for the Potion of Power
- The Trouble with Tetris
- The Big Game
- The Lost City of Kongoland
- Once Upon a Time Machine
- The Feud of Faxanadu
- Having a Ball
- The Trojan Dragon
- I Wish I Was a Wombatman
- The Invasion of the Paper Pedalers
- Germ Wars
- When Mother Brain Rules